Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_13017 | Not Available | Positive | 3355245 - 3355748 | 19042.4 |
| lipoate-protein ligase a | VIS19158_13022 | Not Available | Positive | 3355803 - 3356513 | 25897.2 |
| glycine betaine abc transporter atp-binding protein | VIS19158_13027 | Not Available | Negative | 3356594 - 3357832 | 45724.5 |
| glycine betaine/l-proline abc transporter permease protein | VIS19158_13032 | Not Available | Negative | 3357825 - 3358724 | 32625.2 |
| hypothetical protein | VIS19158_13037 | Not Available | Negative | 3358821 - 3359822 | 36557.0 |
| putative transport protein | VIS19158_13042 | Not Available | Negative | 3360047 - 3361660 | 61939.7 |
| putative integral membrane protein | VIS19158_13047 | Not Available | Negative | 3362085 - 3362702 | 22658.4 |
| putrescine transporter | VIS19158_13052 | Not Available | Positive | 3363190 - 3364506 | 46464.5 |
| biodegradative arginine decarboxylase | VIS19158_13057 | Not Available | Positive | 3364570 - 3366635 | 77819.4 |
| putative rtx toxin | VIS19158_06285 | Not Available | Negative | 3366636 - 3367304 | 23623.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
