Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase | VIS19158_15044 | Not Available | Negative | 3014799 - 3015815 | 37632.2 |
| phosphoglycolate phosphatase | VIS19158_15049 | Not Available | Negative | 3015932 - 3016612 | 24302.9 |
| ribulose-phosphate 3-epimerase | VIS19158_15054 | Not Available | Negative | 3016638 - 3017309 | 24335.6 |
| dna adenine methylase | VIS19158_15059 | Not Available | Negative | 3017413 - 3018267 | 32376.3 |
| hypothetical protein | VIS19158_15064 | Not Available | Negative | 3018392 - 3019864 | 54885.7 |
| 3-dehydroquinate synthase | VIS19158_15069 | Not Available | Negative | 3019960 - 3021063 | 39934.3 |
| shikimate kinase i | VIS19158_15074 | Not Available | Negative | 3021094 - 3021612 | 19234.8 |
| type iv pilus assembly protein pilq | VIS19158_15079 | Not Available | Negative | 3021777 - 3023459 | 61042.1 |
| type iv pilus biogenesis protein pilp | VIS19158_15084 | Not Available | Negative | 3023492 - 3024070 | 21556.3 |
| type iv pilus assembly protein pilo | VIS19158_15089 | Not Available | Negative | 3024057 - 3024647 | 22542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
