Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative o-antigen ligase | VIS19158_09837 | Not Available | Negative | 2929057 - 2930256 | 45057.1 |
| adp-heptose--lps heptosyltransferase ii | VIS19158_09842 | Not Available | Negative | 2930253 - 2931278 | 37712.1 |
| glycosyl transferase family protein | VIS19158_09847 | Not Available | Negative | 2931275 - 2932006 | 28020.8 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | VIS19158_09852 | Not Available | Negative | 2932006 - 2932995 | 37602.4 |
| nucleotide sugar dehydrogenase | VIS19158_09857 | Not Available | Negative | 2933141 - 2934307 | 43282.4 |
| adp-l-glycero-d-mannoheptose-6-epimerase | VIS19158_09862 | Not Available | Negative | 2934352 - 2935293 | 35096.3 |
| transcriptional activator rfah | VIS19158_09867 | Not Available | Positive | 2935557 - 2935859 | 11335.6 |
| hypothetical protein | VIS19158_09872 | Not Available | Positive | 2935925 - 2936071 | 5314.34 |
| hypothetical protein | VIS19158_09877 | Not Available | Positive | 2936411 - 2936539 | 5057.12 |
| putative transposase ynci | VIS19158_09882 | Not Available | Positive | 2936859 - 2937512 | 24704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
