Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase | VIS19158_13147 | Not Available | Positive | 2637266 - 2639869 | 95389.5 |
| hypothetical protein | VIS19158_13152 | Not Available | Positive | 2639883 - 2641157 | 45052.8 |
| hypothetical protein | VIS19158_13157 | Not Available | Positive | 2641291 - 2643168 | 69515.4 |
| hypothetical protein | VIS19158_13162 | Not Available | Positive | 2643319 - 2643786 | 17577.6 |
| sel1 domain-containing protein | VIS19158_13167 | Not Available | Negative | 2643953 - 2645284 | 49802.5 |
| hypothetical protein | VIS19158_13172 | Not Available | Positive | 2645616 - 2645831 | 8319.96 |
| rnd family efflux transporter mfp subunit | VIS19158_13177 | Not Available | Positive | 2646735 - 2647877 | 40354.6 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | VIS19158_13182 | Not Available | Positive | 2647890 - 2651042 | 113311.0 |
| accessory colonization factor acfa | VIS19158_13187 | Not Available | Negative | 2651160 - 2651732 | 21086.9 |
| chloramphenicol acetyltransferase | VIS19158_13192 | Not Available | Negative | 2651970 - 2652629 | 25635.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
