Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_06270 | Not Available | Positive | 2615460 - 2615921 | 16962.3 |
| hypothetical protein | VIS19158_06275 | Not Available | Positive | 2615914 - 2617842 | 73510.5 |
| methyl-accepting chemotaxis protein | VIS19158_06280 | Not Available | Positive | 2618110 - 2619195 | 40497.8 |
| tcpi, toxin-coregulated pilus biosynthesis protein | VIS19158_13062 | Not Available | Positive | 2619957 - 2621666 | 62567.5 |
| n-acetylglucosamine-6-phosphate deacetylase | VIS19158_13067 | Not Available | Negative | 2621815 - 2622948 | 40586.3 |
| n-acetylmannosamine kinase | VIS19158_13072 | Not Available | Negative | 2622951 - 2623832 | 30576.8 |
| n-acetylmannosamine-6-phosphate 2-epimerase | VIS19158_13077 | Not Available | Negative | 2623832 - 2624530 | 24696.3 |
| trap-type c4-dicarboxylate transport system, periplasmic component | VIS19158_13082 | Not Available | Positive | 2624808 - 2625773 | 35616.9 |
| trap-type c4-dicarboxylate transport system, small permease component | VIS19158_13087 | Not Available | Positive | 2625851 - 2626360 | 19046.7 |
| hypothetical protein | VIS19158_13092 | Not Available | Positive | 2626367 - 2627650 | 45571.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
