Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-2-dehydro-3-deoxyheptonate aldolase | VIS19158_01679 | Not Available | Positive | 2512057 - 2513130 | 39502.0 |
| bifunctional chorismate mutase/prephenate dehydrogenase | VIS19158_01684 | Not Available | Positive | 2513152 - 2514279 | 42053.6 |
| hypothetical protein | VIS19158_01689 | Not Available | Negative | 2514319 - 2515197 | 32434.1 |
| hypothetical protein | VIS19158_01694 | Not Available | Negative | 2515312 - 2515683 | 13917.8 |
| putative abc transporter atp-binding protein | VIS19158_01699 | Not Available | Negative | 2515911 - 2517578 | 62039.7 |
| soluble lytic murein transglycosylase | VIS19158_01704 | Not Available | Positive | 2517832 - 2519787 | 74721.2 |
| trp operon repressor | VIS19158_01709 | Not Available | Positive | 2519802 - 2520104 | 11192.5 |
| ntpase | VIS19158_01714 | Not Available | Negative | 2520168 - 2520701 | 19171.8 |
| signal protein domain/ggdef domain-containing protein | VIS19158_01719 | Not Available | Negative | 2520667 - 2523012 | 89692.9 |
| putative spermidine/putrescine abc transporter, periplasmic spermidine/putrescine-binding protein | VIS19158_01724 | Not Available | Negative | 2522996 - 2523958 | 36105.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
