Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_17576 | Not Available | Negative | 1960207 - 1960737 | 18834.3 |
| rod shape-determining protein roda | VIS19158_17581 | Not Available | Negative | 1960954 - 1962063 | 39367.3 |
| cold shock-like protein cspa | VIS19158_17586 | Not Available | Positive | 1962814 - 1963026 | 7583.89 |
| lysr family transcriptional regulator | VIS19158_17591 | Not Available | Positive | 1963470 - 1964369 | 33591.5 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | VIS19158_17596 | Not Available | Negative | 1964463 - 1964996 | 19916.0 |
| hypothetical protein | VIS19158_17601 | Not Available | Negative | 1965010 - 1965552 | 21373.0 |
| nad(p)h dehydrogenase (quinone) | VIS19158_17606 | Not Available | Positive | 1965975 - 1966541 | 20946.8 |
| nupc family protein | VIS19158_17611 | Not Available | Positive | 1966548 - 1967753 | 41617.0 |
| hypothetical protein | VIS19158_17616 | Not Available | Negative | 1967838 - 1968518 | 25891.1 |
| n-ribosylnicotinamide phosphorylase | VIS19158_17621 | Not Available | Positive | 1968825 - 1969556 | 26203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
