Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hflk protein | VIS19158_19051 | Not Available | Negative | 1911227 - 1912423 | 43797.9 |
| putative gtpase hflx | VIS19158_19056 | Not Available | Negative | 1912469 - 1913758 | 48696.4 |
| rna-binding protein hfq | VIS19158_19061 | Not Available | Negative | 1913799 - 1914059 | 9711.68 |
| trna delta(2)-isopentenylpyrophosphate transferase | VIS19158_19066 | Not Available | Negative | 1914243 - 1915190 | 35699.0 |
| dna mismatch repair protein | VIS19158_19071 | Not Available | Negative | 1915187 - 1917265 | 76624.1 |
| n-acetylmuramoyl-l-alanine amidase amib precursor | VIS19158_19076 | Not Available | Negative | 1917278 - 1918996 | 62308.2 |
| hypothetical protein | VIS19158_19081 | Not Available | Negative | 1918990 - 1919454 | 17381.5 |
| iron-sulfur cluster-binding protein | VIS19158_19086 | Not Available | Positive | 1919643 - 1920764 | 42533.2 |
| putative outer membrane adhesin like protein | VIS19158_07732 | Not Available | Positive | 1921354 - 1921630 | 9372.68 |
| hypothetical protein | VIS19158_03477 | Not Available | Negative | 1921631 - 1922029 | 14394.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
