Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii/iv secretion system protein, atp binding domain | VIS19158_02690 | Not Available | Positive | 1420749 - 1422038 | 47361.4 |
| tadb-like protein involved in pilus formation and/or protein secretion | VIS19158_02695 | Not Available | Positive | 1422038 - 1422958 | 34875.0 |
| type ii secretion system protein f | VIS19158_02700 | Not Available | Positive | 1422955 - 1423842 | 33124.8 |
| tpr-repeat secretory protein | VIS19158_02705 | Not Available | Positive | 1423835 - 1425193 | 49950.3 |
| hypothetical protein | VIS19158_02710 | Not Available | Positive | 1425263 - 1425745 | 18625.9 |
| membrane associated secretion system protein | VIS19158_02715 | Not Available | Positive | 1425726 - 1426280 | 20730.9 |
| membrane associated secretion system protein | VIS19158_02720 | Not Available | Positive | 1426283 - 1427626 | 49102.3 |
| outer membrane protein | VIS19158_02725 | Not Available | Positive | 1427640 - 1428257 | 22105.2 |
| putative fimbrial usher protein | VIS19158_02730 | Not Available | Negative | 1428449 - 1430842 | 90514.2 |
| hypothetical protein | VIS19158_02735 | Not Available | Negative | 1430854 - 1431519 | 25189.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
