Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_05398 | Not Available | Negative | 1240269 - 1240877 | 22068.2 |
| lysr family transcriptional regulator | VIS19158_05403 | Not Available | Positive | 1241077 - 1241982 | 33657.9 |
| malate synthase | VIS19158_05408 | Not Available | Positive | 1242580 - 1244217 | 61516.9 |
| isocitrate lyase | VIS19158_05413 | Not Available | Positive | 1244378 - 1245688 | 47906.2 |
| putative acetoin utilization protein | VIS19158_05418 | Not Available | Negative | 1245921 - 1246364 | 16530.1 |
| hypothetical protein | VIS19158_05423 | Not Available | Negative | 1246631 - 1248571 | 70991.6 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | VIS19158_05428 | Not Available | Positive | 1248847 - 1249899 | 38919.3 |
| queuine trna-ribosyltransferase | VIS19158_05433 | Not Available | Positive | 1250119 - 1251306 | 44841.8 |
| preprotein translocase subunit yajc | VIS19158_05438 | Not Available | Positive | 1251509 - 1251838 | 11840.7 |
| preprotein translocase subunit secd | VIS19158_05443 | Not Available | Positive | 1251859 - 1253715 | 66937.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
