Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_05298 | Not Available | Positive | 1220334 - 1220561 | 8197.61 |
| hypothetical protein | VIS19158_05303 | Not Available | Positive | 1220583 - 1221863 | 44789.4 |
| hypothetical protein | VIS19158_05308 | Not Available | Positive | 1221865 - 1222356 | 17492.1 |
| hypothetical protein | VIS19158_05313 | Not Available | Positive | 1222353 - 1222883 | 19645.4 |
| type ii/iv secretion system atpase tadz/cpae associated with flp pilus assembly | VIS19158_05318 | Not Available | Positive | 1222903 - 1224114 | 44982.9 |
| flp pilus assembly protein | VIS19158_05323 | Not Available | Positive | 1224127 - 1225554 | 53261.9 |
| putative tight adherence tadb-related transmembrane protein | VIS19158_05328 | Not Available | Positive | 1225567 - 1226535 | 36805.3 |
| putative tight adherence tadc-related transmembrane protein | VIS19158_05333 | Not Available | Positive | 1226538 - 1227485 | 35213.5 |
| hypothetical protein | VIS19158_05338 | Not Available | Positive | 1227518 - 1228531 | 37085.8 |
| hypothetical protein | VIS19158_05343 | Not Available | Negative | 1228622 - 1229767 | 40363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
