Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | VIS19158_04898 | Not Available | Negative | 1126744 - 1127982 | 46852.9 |
| trna (adenine-n(6)-)-methyltransferase | VIS19158_04903 | Not Available | Negative | 1128128 - 1128847 | 26628.0 |
| branched-chain amino acid transport system ii carrier protein | VIS19158_04908 | Not Available | Positive | 1129157 - 1130470 | 46134.1 |
| peptide chain release factor rf-2 | VIS19158_04913 | Not Available | Positive | 1130798 - 1131730 | 34729.4 |
| lysyl-trna synthetase | VIS19158_04918 | Not Available | Positive | 1131765 - 1133300 | 57957.1 |
| sigma-54 dependent transcriptional regulator | VIS19158_04923 | Not Available | Positive | 1133626 - 1134960 | 50157.2 |
| outer membrane channel protein | VIS19158_04928 | Not Available | Negative | 1135067 - 1136383 | 47483.2 |
| adp-ribose pyrophosphatase | VIS19158_04933 | Not Available | Positive | 1136614 - 1137243 | 23892.0 |
| hypothetical protein | VIS19158_04938 | Not Available | Positive | 1137231 - 1137671 | 16711.1 |
| cyclic 3',5'-adenosine monophosphate phosphodiesterase | VIS19158_04943 | Not Available | Positive | 1137681 - 1138502 | 30433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
