Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna-processing protein rimm | VIS19158_11928 | Not Available | Positive | 1087208 - 1087762 | 21262.2 |
| trna (guanine-n(1)-)-methyltransferase | VIS19158_11933 | Not Available | Positive | 1087790 - 1088539 | 27906.4 |
| 50s ribosomal protein l19 | VIS19158_11938 | Not Available | Positive | 1088589 - 1088942 | 13202.1 |
| zinc-binding protein | VIS19158_11943 | Not Available | Negative | 1089168 - 1089362 | 7185.21 |
| hypothetical protein | VIS19158_11948 | Not Available | Negative | 1089438 - 1090178 | 28655.1 |
| dephospho-coa kinase | VIS19158_11953 | Not Available | Negative | 1090213 - 1090821 | 22751.5 |
| type ii secretory pathway, prepilin signal peptidase pulo | VIS19158_11958 | Not Available | Negative | 1090826 - 1091695 | 32385.5 |
| type iv pilin biogenesis protein | VIS19158_11963 | Not Available | Negative | 1091801 - 1092967 | 43263.7 |
| type iv pilus assembly protein pilb | VIS19158_11968 | Not Available | Negative | 1093078 - 1094760 | 61848.6 |
| type iv pilin pila | VIS19158_11973 | Not Available | Negative | 1094760 - 1095218 | 15666.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
