Escherichia coli 9.0111

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 9.0111 is a Gram-negative, rod-shaped bacterium predominantly found in pairs or as single cells, exhibiting a facultative anaerobic metabolism. This strain thrives optimally at 37.0°C, a temperature that aligns with the physiological conditions of its natural habitat within host organisms. E. coli is known for its versatility in metabolic processes, allowing it to adapt to both aerobic and anaerobic environments, which is particularly advantageous in the variable conditions within the gut flora of mammals. As a host-associated microbe, E. coli 9.0111 likely plays a significant role in the microbiome, contributing to various biological processes such as nutrient absorption and the maintenance of intestinal homeostasis. The capacity to exist in pairs or as single cells may enhance its survival and adaptability within the dynamic gastrointestinal environment, facilitating interactions with other microbial species and the host's immune system. This strain exemplifies the complex relationships that can develop between host organisms and their resident microbiota, underscoring the importance of E. coli in maintaining a balanced microbial community. Understanding such traits of E. coli 9.0111 can provide insights into its ecological roles and potential implications for host health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain9.0111

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 9.0111
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 9.0111 ctg1125855384389, whole genome shotgun

Gene Summary

Adenine Count

1416673 bp

Thymine Count

1415300 bp

Guanine Count

1454373 bp

Cytosine Count

1442919 bp

Genome Length

5729265 bp

Protein-coding Genes

5408 genes

Non-Coding Genes

772 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic oligopeptide-binding proteinEC90111_3177P23843Positive3031545 - 303322162659.1
oligopeptide transport system permease protein oppbEC90111_3178P0AFH4Positive3033307 - 303422733445.3
oligopeptide abc transporter, permease protein oppcEC90111_3179P0AFH7Positive3034242 - 303515033005.9
oligopeptide abc transporter, atp-binding protein oppdEC90111_3180P76027Positive3035162 - 303617537148.7
oligopeptide/dipeptide transporter, c-terminal domain proteinEC90111_3181P77737Positive3036172 - 303717637197.8
pf04269 family proteinEC90111_3182A7ZL19Negative3037229 - 303755812687.7
cardiolipin synthetaseEC90111_3183A7ZL20Negative3037593 - 303905354825.6
putative potassium channel proteinEC90111_3184P31069Negative3039424 - 304063244336.2
hypothetical proteinEC90111_3185P0AB56Negative3040976 - 304127210602.6
tonb-dependent receptorEC90111_3186P02929Positive3041481 - 304221526633.4

Displaying genes 3651 – 3660 of 6180 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.