Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | DEC1B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1294015 bp
Thymine Count
1285271 bp
Guanine Count
1309759 bp
Cytosine Count
1309334 bp
Genome Length
5198379 bp
Protein-coding Genes
5000 genes
Non-Coding Genes
479 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-lee-encoded type iii secreted effector domain protein | ECDEC1B_3534 | Not Available | Positive | 3352681 - 3352989 | 11950.5 |
| t3ss secreted effector espl-like domain protein | ECDEC1B_3535 | Not Available | Positive | 3352974 - 3353933 | 35943.1 |
| hypothetical protein | ECDEC1B_3536 | Not Available | Positive | 3354542 - 3355531 | 37628.5 |
| t3ss effector protein nlee | ECDEC1B_3537 | Not Available | Positive | 3355580 - 3356254 | 26058.3 |
| transposase insp for is630 | ECDEC1B_3538 | Not Available | Positive | 3356631 - 3357476 | 32895.9 |
| efa1-lifa protein | ECDEC1B_3539 | Not Available | Positive | 3358167 - 3359603 | 55650.2 |
| efa1/lifa-like domain protein | ECDEC1B_3540 | Not Available | Positive | 3359980 - 3360690 | 27153.6 |
| efa1/lifa-like domain protein | ECDEC1B_3541 | Not Available | Positive | 3360738 - 3361757 | 40017.1 |
| cysteine protease, yopt-type domain protein | ECDEC1B_3542 | Not Available | Positive | 3361958 - 3366745 | 177732.0 |
| efa1/lifa-like domain protein | ECDEC1B_3543 | Not Available | Positive | 3366757 - 3367704 | 36155.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





