Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | DEC1B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1294015 bp
Thymine Count
1285271 bp
Guanine Count
1309759 bp
Cytosine Count
1309334 bp
Genome Length
5198379 bp
Protein-coding Genes
5000 genes
Non-Coding Genes
479 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding domain protein | ECDEC1B_3204 | Not Available | Negative | 3030742 - 3031284 | 20328.4 |
| hydrogenase 4, large subunit | ECDEC1B_3205 | Not Available | Negative | 3031294 - 3033003 | 64970.1 |
| nadh dehydrogenase family protein | ECDEC1B_3206 | Not Available | Negative | 3033021 - 3033944 | 33059.4 |
| nadh-ubiquinone/plastoquinone (complex i), various chains family protein | ECDEC1B_3207 | Not Available | Negative | 3033947 - 3035773 | 64113.2 |
| 4fe-4s binding domain protein | ECDEC1B_3208 | Not Available | Negative | 3035770 - 3036381 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | ECDEC1B_3209 | Not Available | Negative | 3036506 - 3036967 | 17656.0 |
| hydrogenase nickel insertion protein hypa | ECDEC1B_3210 | Not Available | Positive | 3037179 - 3037529 | 13168.9 |
| hydrogenase accessory protein hypb | ECDEC1B_3211 | Not Available | Positive | 3037533 - 3038405 | 31566.8 |
| hydrogenase assembly chaperone hypc/hupf | ECDEC1B_3212 | Not Available | Positive | 3038396 - 3038668 | 9732.58 |
| hydrogenase expression/formation protein hypd | ECDEC1B_3213 | Not Available | Positive | 3038668 - 3039789 | 41397.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





