Escherichia coli DEC1B

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli DEC1B is a rod-shaped, Gram-negative bacterium that typically exists in pairs or as single cells. This strain thrives optimally at 37.0°C, which aligns with the average body temperature of its host organisms. As a facultative anaerobe, E. coli DEC1B can adapt its metabolic processes to utilize both aerobic and anaerobic conditions, enabling it to survive in diverse environments associated with its host. The habitat of E. coli DEC1B is host-associated, suggesting a potential role in the normal microbiota of its host and possibly contributing to various physiological processes. While the specific interactions and functions of this strain within its host are not detailed, it is well established that members of the E. coli species play crucial roles in gut health, including nutrient absorption, synthesis of vitamins, and competition against pathogenic microorganisms. Given its adaptability to different oxygen levels and its optimal growth temperature, E. coli DEC1B may exhibit behaviors that facilitate its survival and proliferation in the dynamic environments of the gastrointestinal tract. This characteristic adaptability highlights the ecological importance of E. coli strains, including DEC1B, in maintaining the balance of microbial communities within their host environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainDEC1B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli DEC1B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli DEC1B


Gene Summary

Adenine Count

1294015 bp

Thymine Count

1285271 bp

Guanine Count

1309759 bp

Cytosine Count

1309334 bp

Genome Length

5198379 bp

Protein-coding Genes

5000 genes

Non-Coding Genes

479 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Bacteriophage head decoration proteinECDEC1B_0268Not Available+275127 - 27547411997.2
Bacteriophage major capsid proteinECDEC1B_0269Not Available+275532 - 27656038527.9
Head assembly protein fiECDEC1B_0270Not Available+276612 - 27698613528.0
Head-tail joining proteinECDEC1B_0271Not Available+276979 - 27733212591.7
Tail componentECDEC1B_0272Not Available+277347 - 27788020213.1
Tail componentECDEC1B_0273Not Available+277877 - 27827214868.3
Major tail protein vECDEC1B_0274Not Available+278280 - 27903226284.6
Tail componentECDEC1B_0275Not Available+279046 - 27947715617.3
Tail componentECDEC1B_0276Not Available+279528 - 27991714215.9
Tail componentECDEC1B_0277Not Available+279898 - 28245992446.0

Displaying genes 1 – 10 of 5479 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites