Helicobacter pylori F30

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori F30 is a Gram-negative bacterium characterized by its spirilla shape and the presence of single cells in arrangement. This microbe thrives optimally at a temperature of 37.0°C and is classified as microaerophilic, indicating that it requires reduced levels of oxygen for growth. H. pylori F30 is typically found in host-associated habitats, where it may colonize the gastric mucosa of various hosts. The microaerophilic nature of H. pylori F30 suggests its adaptation to environments with limited oxygen availability, such as the human stomach, which has a unique microenvironment conducive to its survival and proliferation. This adaptation may contribute to its role in the gastric ecosystem, influencing both the microbial diversity and the host's physiological responses. Understanding the growth conditions and environmental preferences of H. pylori F30 can provide insights into its interactions within the host and the potential implications for gastrointestinal health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainF30

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori F30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori F30

NC_017365.1NC_017369.1

Gene Summary

Adenine Count

479551 bp

Thymine Count

481168 bp

Guanine Count

304357 bp

Cytosine Count

305488 bp

Genome Length

1570564 bp

Protein-coding Genes

1475 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam/spasm domain-containing proteinHPF30_RS03930Not AvailablePositive814464 - 81533633378.2
ai-2e family transporterHPF30_RS03935O25291Negative815466 - 81651239780.0
diaminopimelate epimeraseHPF30_RS03940B2UTR2Positive816628 - 81744930775.0
ykgb family proteinHPF30_RS03945P46928Positive817540 - 81818723981.8
ribbon-helix-helix domain-containing proteinHPF30_RS03950Not AvailableNegative818213 - 8184589459.18
hypothetical proteinHPF30_RS03955Not AvailablePositive818631 - 81988148994.4
30s ribosomal protein s21HPF30_RS03960B6JLE4Positive819983 - 8201958627.68
3-oxoacyl-acp reductase fabgHPF30_RS03965P0AEK2Positive820232 - 82097526696.1
acyl carrier proteinHPF30_RS03970B6JLE2Positive821206 - 8214428562.17
beta-ketoacyl-acp synthase iiHPF30_RS03980Q83E37Positive821744 - 82298243530.4

Displaying genes 781 – 790 of 1528 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

93 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 93 metabolites

Health Effects

No health effects information available for this bacterium.