Helicobacter pylori F30

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori F30 is a Gram-negative bacterium characterized by its spirilla shape and the presence of single cells in arrangement. This microbe thrives optimally at a temperature of 37.0°C and is classified as microaerophilic, indicating that it requires reduced levels of oxygen for growth. H. pylori F30 is typically found in host-associated habitats, where it may colonize the gastric mucosa of various hosts. The microaerophilic nature of H. pylori F30 suggests its adaptation to environments with limited oxygen availability, such as the human stomach, which has a unique microenvironment conducive to its survival and proliferation. This adaptation may contribute to its role in the gastric ecosystem, influencing both the microbial diversity and the host's physiological responses. Understanding the growth conditions and environmental preferences of H. pylori F30 can provide insights into its interactions within the host and the potential implications for gastrointestinal health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainF30

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori F30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori F30

NC_017365.1NC_017369.1

Gene Summary

Adenine Count

479551 bp

Thymine Count

481168 bp

Guanine Count

304357 bp

Cytosine Count

305488 bp

Genome Length

1570564 bp

Protein-coding Genes

1475 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase nickel incorporation protein hypbHPF30_RS02335Q9ZKU8Positive470648 - 47137627326.0
hypc/hybg/hupf family hydrogenase formation chaperoneHPF30_RS02340Q7VJB9Positive471376 - 4716128665.66
hydrogenase formation protein hypdHPF30_RS02345P42033Positive471615 - 47272741013.6
hypothetical proteinHPF30_RS02350Not AvailableNegative472678 - 47319920304.8
Trna-glnNot AvailableNot AvailablePositive473284 - 473358Not Available
Trna-metNot AvailableNot AvailablePositive473384 - 473460Not Available
hop family adhesin babaHPF30_RS02370Not AvailablePositive473720 - 47594580430.2
hypothetical proteinHPF30_RS02375Not AvailablePositive476556 - 47693314867.5
type ii toxin-antitoxin system mrna interferase toxin, rele/stbe familyHPF30_RS02380P44041Positive476914 - 47718010305.8
acyl-coa thioesteraseHPF30_RS02385P0A0Q8Negative477286 - 47781019515.6

Displaying genes 461 – 470 of 1528 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

93 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 93 metabolites

Health Effects

No health effects information available for this bacterium.