Helicobacter pylori F30

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori F30 is a Gram-negative bacterium characterized by its spirilla shape and the presence of single cells in arrangement. This microbe thrives optimally at a temperature of 37.0°C and is classified as microaerophilic, indicating that it requires reduced levels of oxygen for growth. H. pylori F30 is typically found in host-associated habitats, where it may colonize the gastric mucosa of various hosts. The microaerophilic nature of H. pylori F30 suggests its adaptation to environments with limited oxygen availability, such as the human stomach, which has a unique microenvironment conducive to its survival and proliferation. This adaptation may contribute to its role in the gastric ecosystem, influencing both the microbial diversity and the host's physiological responses. Understanding the growth conditions and environmental preferences of H. pylori F30 can provide insights into its interactions within the host and the potential implications for gastrointestinal health.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Campylobacterota
Class	Epsilonproteobacteria
Order	Campylobacterales
Family	Helicobacteraceae
Genus	Helicobacter
Species	Helicobacter pylori
Strain	F30

Profile

Physiology
Gram staining properties	Negative
Shape	Spirilla
Mobility	No
Flagellar presence	Yes
Number of membranes	2

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Microaerophilic
Optimal temperature	37
Temperature range	Mesophilic
Habitat	HostAssociated
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Singles
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Helicobacter pylori F30

NC_017365.1 NC_017369.1

Gene Summary

Adenine Count

479551 bp

Thymine Count

481168 bp

Guanine Count

304357 bp

Cytosine Count

305488 bp

Genome Length

1570564 bp

Protein-coding Genes

1475 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
serine o-acetyltransferase	HPF30_RS00960	Q9ZK14	Positive	174517 - 175032	18204.4
hnh endonuclease	HPF30_RS00965	Q51083	Positive	175078 - 175776	26834.4
dna adenine methylase	HPF30_RS00970	P24582	Positive	175785 - 176768	36939.4
had family hydrolase	HPF30_RS00975	Not Available	Positive	176872 - 177540	25512.6
abc transporter atp-binding protein	HPF30_RS00980	Q0P9C4	Negative	177549 - 179285	66298.7
Trna-thr	Not Available	Not Available	Positive	179483 - 179558	Not Available
Trna-tyr	Not Available	Not Available	Positive	179586 - 179670	Not Available
Trna-gly	Not Available	Not Available	Positive	179686 - 179762	Not Available
Trna-thr	Not Available	Not Available	Positive	179793 - 179867	Not Available
elongation factor tu	HPF30_RS01005	B2UUW8	Positive	179994 - 181193	43624.4

Displaying genes 191 – 200 of 1528 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8	Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0000642	S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6S	Not available	Average397.406Da Monoisotopic397.105604055Da
BASm0001167	triphosphateO10P3	`14127-68-5`	Average252.9153Da Monoisotopic252.8704308Da
BASm0001697	(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4	Not available	Average132.1146Da Monoisotopic132.042258744Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001779	orotateC5H3N2O4	Not available	Average155.09Da Monoisotopic155.0098302Da