Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine aminopeptidase domain-containing protein | OSCCYDRAFT_RS23230 | Not Available | Positive | 5299675 - 5300535 | 31296.9 |
| alpha-amylase | OSCCYDRAFT_RS23235 | P06279 | Negative | 5300710 - 5302191 | 56927.4 |
| ai-2e family transporter | OSCCYDRAFT_RS23240 | Q55153 | Negative | 5302339 - 5303376 | 38041.8 |
| alpha-amylase family glycosyl hydrolase | OSCCYDRAFT_RS23245 | Not Available | Negative | 5303653 - 5305122 | 56991.4 |
| polyphosphate kinase 2 family protein | OSCCYDRAFT_RS23250 | Q6N140 | Negative | 5305160 - 5306059 | 35095.2 |
| phage holin family protein | OSCCYDRAFT_RS23255 | Not Available | Negative | 5306281 - 5306643 | 12549.2 |
| duf4912 domain-containing protein | OSCCYDRAFT_RS23260 | Not Available | Positive | 5307326 - 5309845 | 91282.0 |
| duf937 domain-containing protein | OSCCYDRAFT_RS23265 | Not Available | Positive | 5309964 - 5310485 | 17650.2 |
| response regulator | OSCCYDRAFT_RS23270 | Not Available | Negative | 5310574 - 5310975 | 14814.0 |
| hypothetical protein | OSCCYDRAFT_RS23275 | Not Available | Negative | 5311244 - 5311471 | 8644.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.