Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | OSCCYDRAFT_RS22980 | Not Available | Negative | 5228083 - 5228505 | 15604.7 |
| heavy metal translocating p-type atpase | OSCCYDRAFT_RS22985 | P37385 | Negative | 5228716 - 5231181 | 87678.8 |
| cation:proton antiporter | OSCCYDRAFT_RS22990 | B1J2K7 | Positive | 5231552 - 5233570 | 72114.2 |
| transposase | OSCCYDRAFT_RS22995 | Not Available | Positive | 5233664 - 5235004 | 51348.1 |
| methylglyoxal synthase | OSCCYDRAFT_RS23000 | Q55452 | Positive | 5235328 - 5236614 | 45396.1 |
| uma2 family endonuclease | OSCCYDRAFT_RS26360 | Not Available | Positive | 5236900 - 5237641 | 26366.4 |
| glycoside hydrolase family 1 protein | OSCCYDRAFT_RS23015 | Q9FIW4 | Negative | 5237763 - 5239352 | 61392.4 |
| udp-n-acetylglucosamine--lps n-acetylglucosamine transferase | OSCCYDRAFT_RS23020 | P54166 | Negative | 5239333 - 5240532 | 43941.3 |
| peptide-methionine (r)-s-oxide reductase msrb | OSCCYDRAFT_RS23025 | Q72NN2 | Positive | 5240638 - 5241051 | 15358.1 |
| tetratricopeptide repeat protein | OSCCYDRAFT_RS23030 | Q80XJ3 | Positive | 5241415 - 5241774 | 13358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.