Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | OSCCYDRAFT_RS22880 | O34392 | Positive | 5208672 - 5209454 | 27980.9 |
| n-acetylmannosamine-6-phosphate 2-epimerase | OSCCYDRAFT_RS22885 | Q8DGQ5 | Positive | 5209459 - 5210172 | 24980.1 |
| nad(p)/fad-dependent oxidoreductase | OSCCYDRAFT_RS22890 | Q795R8 | Positive | 5210203 - 5211426 | 44123.4 |
| sh3 domain-containing protein | OSCCYDRAFT_RS22895 | Not Available | Negative | 5211434 - 5212177 | 25781.9 |
| site-specific dna-methyltransferase | OSCCYDRAFT_RS22900 | P28638 | Positive | 5212480 - 5213367 | 34078.4 |
| npun_f0494 family protein | OSCCYDRAFT_RS22905 | Not Available | Positive | 5213747 - 5214157 | 15581.7 |
| cobyric acid synthase cobq | OSCCYDRAFT_RS22910 | Q8YUG9 | Positive | 5214270 - 5215754 | 54230.5 |
| putative sugar o-methyltransferase | OSCCYDRAFT_RS22915 | Not Available | Positive | 5215862 - 5216974 | 42374.8 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | OSCCYDRAFT_RS22920 | Not Available | Positive | 5217186 - 5217425 | 8486.23 |
| glu/leu/phe/val dehydrogenase | OSCCYDRAFT_RS22925 | P54386 | Negative | 5217572 - 5218876 | 47558.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.