Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | OSCCYDRAFT_RS21030 | Q9P016 | Positive | 4762377 - 4762832 | 17516.9 |
| hypothetical protein | OSCCYDRAFT_RS21035 | Not Available | Positive | 4762745 - 4764397 | 62065.3 |
| rida family protein | OSCCYDRAFT_RS21040 | P52761 | Negative | 4764574 - 4764969 | 13796.7 |
| nudix hydrolase | OSCCYDRAFT_RS21045 | Not Available | Negative | 4765058 - 4765510 | 17379.4 |
| 4-alpha-glucanotransferase | OSCCYDRAFT_RS21050 | P72785 | Positive | 4765656 - 4767194 | 59089.7 |
| nine protein | OSCCYDRAFT_RS21055 | Q54KZ0 | Positive | 4767326 - 4767796 | 16867.6 |
| transposase | OSCCYDRAFT_RS21060 | Not Available | Positive | 4768003 - 4769343 | 51348.1 |
| pbp1a family penicillin-binding protein | OSCCYDRAFT_RS21065 | O66874 | Negative | 4769496 - 4771298 | 65783.6 |
| tyrosine--trna ligase | OSCCYDRAFT_RS21070 | Q31K19 | Positive | 4771651 - 4772922 | 46903.0 |
| hypothetical protein | OSCCYDRAFT_RS21075 | Not Available | Positive | 4772945 - 4773499 | 20043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.