Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybay family lipoprotein | OSCCYDRAFT_RS20975 | P77717 | Positive | 4747301 - 4747882 | 21076.1 |
| tetratricopeptide repeat protein | OSCCYDRAFT_RS20980 | Not Available | Negative | 4747874 - 4748722 | 31369.1 |
| translation initiation factor | OSCCYDRAFT_RS20985 | Q55397 | Negative | 4748858 - 4749220 | 13106.7 |
| hypothetical protein | OSCCYDRAFT_RS20990 | Not Available | Negative | 4749241 - 4749486 | 8677.18 |
| aldo/keto reductase | OSCCYDRAFT_RS20995 | Not Available | Negative | 4749500 - 4750522 | 38411.1 |
| atp-binding protein | OSCCYDRAFT_RS21000 | Not Available | Negative | 4750810 - 4753359 | 94069.4 |
| hypothetical protein | OSCCYDRAFT_RS21005 | Not Available | Negative | 4754032 - 4754664 | 22336.0 |
| carbamoyl-phosphate synthase large subunit | OSCCYDRAFT_RS21010 | Q8YQL2 | Positive | 4754948 - 4758190 | 118959.0 |
| rna polymerase sigma factor, rpod/siga family | OSCCYDRAFT_RS21020 | Q31QG5 | Positive | 4759005 - 4759961 | 36139.4 |
| caspase family protein | OSCCYDRAFT_RS21025 | Not Available | Negative | 4760028 - 4762271 | 80564.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.