Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | OSCCYDRAFT_RS20865 | P0AFH0 | Positive | 4727710 - 4728219 | 18500.5 |
| transposase | OSCCYDRAFT_RS20870 | Not Available | Positive | 4728306 - 4729646 | 51348.1 |
| abc transporter permease | OSCCYDRAFT_RS20875 | Q8X6V6 | Negative | 4729772 - 4730659 | 32534.4 |
| protoporphyrinogen oxidase hemj | OSCCYDRAFT_RS20880 | P72793 | Negative | 4730662 - 4731270 | 23138.8 |
| duf2811 domain-containing protein | OSCCYDRAFT_RS20885 | Not Available | Negative | 4731460 - 4731660 | 7422.64 |
| duf4347 domain-containing protein | OSCCYDRAFT_RS20895 | Not Available | Positive | 4732327 - 4732797 | 16551.6 |
| class i sam-dependent methyltransferase | OSCCYDRAFT_RS20900 | Not Available | Positive | 4733289 - 4734140 | 31511.0 |
| transposase | OSCCYDRAFT_RS20905 | Not Available | Negative | 4734157 - 4735497 | 51348.1 |
| alpha/beta fold hydrolase | OSCCYDRAFT_RS20910 | O05235 | Negative | 4735706 - 4736599 | 32735.5 |
| translational gtpase typa | OSCCYDRAFT_RS20915 | P72749 | Positive | 4736833 - 4738629 | 66466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.