Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | OSCCYDRAFT_RS20565 | Q8H074 | Positive | 4648387 - 4649889 | 53617.6 |
| hypothetical protein | OSCCYDRAFT_RS20570 | Not Available | Positive | 4650329 - 4650757 | 16909.9 |
| chat domain-containing protein | OSCCYDRAFT_RS20575 | Not Available | Positive | 4650956 - 4653604 | 98547.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4653669 - 4653785 | Not Available |
| glycine--trna ligase subunit alpha | OSCCYDRAFT_RS20585 | B8HU74 | Positive | 4654447 - 4655334 | 34057.3 |
| tfp pilus assembly protein fimt/fimu | OSCCYDRAFT_RS20590 | Not Available | Negative | 4655433 - 4656002 | 21182.9 |
| diaminopimelate epimerase | OSCCYDRAFT_RS20595 | Q8YVD0 | Negative | 4656135 - 4656977 | 30628.7 |
| hfq-related rna-binding protein | OSCCYDRAFT_RS20600 | Not Available | Positive | 4657077 - 4657292 | 8190.94 |
| cation:proton antiporter | OSCCYDRAFT_RS20605 | B5X0N6 | Negative | 4657310 - 4659634 | 83786.6 |
| hypothetical protein | OSCCYDRAFT_RS20610 | Not Available | Negative | 4659947 - 4660666 | 26669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.