Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate cytidylyltransferase | OSCCYDRAFT_RS20000 | Not Available | Positive | 4532086 - 4532946 | 32874.3 |
| pig-l deacetylase family protein | OSCCYDRAFT_RS20005 | Not Available | Positive | 4533033 - 4533692 | 25746.7 |
| glycosyltransferase | OSCCYDRAFT_RS20010 | Not Available | Positive | 4533783 - 4534988 | 44807.7 |
| glycosyltransferase | OSCCYDRAFT_RS20015 | Not Available | Positive | 4535022 - 4535972 | 37868.0 |
| tryptophan-rich sensory protein | OSCCYDRAFT_RS20020 | Not Available | Negative | 4536067 - 4536870 | 29509.6 |
| uma2 family endonuclease | OSCCYDRAFT_RS20030 | P43087 | Negative | 4537185 - 4537466 | 10127.5 |
| is200/is605 family transposase | OSCCYDRAFT_RS20035 | Not Available | Positive | 4537512 - 4537955 | 17326.9 |
| uma2 family endonuclease | OSCCYDRAFT_RS20040 | Q8KCJ0 | Negative | 4537994 - 4538716 | 26538.6 |
| fur family transcriptional regulator | OSCCYDRAFT_RS20045 | Not Available | Positive | 4538941 - 4539342 | 15108.1 |
| hypothetical protein | OSCCYDRAFT_RS20050 | Not Available | Negative | 4539354 - 4540091 | 27330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.