Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein csc2 | OsccyDRAFT_0919 | Not Available | Negative | 1040000 - 1041037 | 38832.2 |
| transposase | OsccyDRAFT_0920 | Not Available | Negative | 1041341 - 1041805 | 17158.3 |
| crispr-associated protein csc3 | OsccyDRAFT_0921 | Not Available | Negative | 1041812 - 1045240 | 130334.0 |
| hypothetical protein | OsccyDRAFT_0922 | Not Available | Negative | 1045244 - 1045378 | 5160.32 |
| crispr-associated helicase, cas3 family | OsccyDRAFT_0923 | Not Available | Negative | 1045366 - 1047495 | 82296.9 |
| hypothetical protein | OsccyDRAFT_0924 | Not Available | Negative | 1047533 - 1047727 | 7634.06 |
| hypothetical protein | OsccyDRAFT_0925 | Not Available | Positive | 1047939 - 1048808 | 33624.4 |
| Trna-gly | Not Available | Not Available | Positive | 1048926 - 1048996 | Not Available |
| calcium/proton exchanger cax | OsccyDRAFT_0927 | Q75XW3 | Negative | 1049185 - 1050267 | 38717.1 |
| hypothetical protein | OsccyDRAFT_0928 | Not Available | Positive | 1050597 - 1051736 | 43175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.