Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | OSCCYDRAFT_RS19360 | Not Available | Positive | 4399421 - 4400425 | 37951.0 |
| duf6882 domain-containing protein | OSCCYDRAFT_RS19365 | Not Available | Negative | 4400556 - 4401026 | 17345.6 |
| tetratricopeptide repeat protein | OSCCYDRAFT_RS19370 | Not Available | Negative | 4401054 - 4402346 | 48587.2 |
| voc family protein | OSCCYDRAFT_RS19375 | Not Available | Negative | 4402343 - 4402723 | 14285.9 |
| duf1963 domain-containing protein | OSCCYDRAFT_RS19380 | Not Available | Negative | 4402748 - 4403119 | 13885.2 |
| ywqg family protein | OSCCYDRAFT_RS19385 | P96719 | Negative | 4403149 - 4403661 | 18892.3 |
| duf6331 family protein | OSCCYDRAFT_RS26295 | Not Available | Negative | 4403876 - 4404541 | 25356.2 |
| class i sam-dependent methyltransferase | OSCCYDRAFT_RS19395 | P9WK00 | Negative | 4404557 - 4405330 | 28896.6 |
| helix-turn-helix domain-containing protein | OSCCYDRAFT_RS19400 | A0A0H2ZIC3 | Positive | 4405601 - 4406497 | 33800.9 |
| atp-binding protein | OSCCYDRAFT_RS19405 | Q06067 | Negative | 4406804 - 4408081 | 48143.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.