Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | OSCCYDRAFT_RS18755 | B7KKT8 | Negative | 4259574 - 4260032 | 16814.3 |
| tigr02450 family trp-rich protein | OSCCYDRAFT_RS18760 | Not Available | Negative | 4260104 - 4260355 | 9760.68 |
| pentapeptide repeat-containing protein | OSCCYDRAFT_RS18765 | Not Available | Positive | 4260575 - 4261363 | 27715.2 |
| duf4347 domain-containing protein | OSCCYDRAFT_RS18770 | Not Available | Negative | 4261366 - 4263606 | 79566.8 |
| peroxiredoxin | OSCCYDRAFT_RS18775 | Q1XDL4 | Positive | 4263987 - 4264583 | 22059.9 |
| peroxiredoxin | OSCCYDRAFT_RS18780 | Not Available | Positive | 4264714 - 4265253 | 20204.3 |
| ferredoxin | OSCCYDRAFT_RS18785 | P00210 | Negative | 4265269 - 4265730 | 17538.9 |
| duf1257 domain-containing protein | OSCCYDRAFT_RS18790 | O78438 | Negative | 4265877 - 4266263 | 14736.1 |
| duf2997 domain-containing protein | OSCCYDRAFT_RS18795 | Not Available | Negative | 4266308 - 4266517 | 7614.91 |
| hypothetical protein | OSCCYDRAFT_RS18800 | Q55650 | Positive | 4266882 - 4267922 | 36765.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.