Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lcp family protein | OSCCYDRAFT_RS18655 | Q8ENF3 | Positive | 4229769 - 4231166 | 50978.1 |
| pentapeptide repeat-containing protein | OSCCYDRAFT_RS18660 | Not Available | Positive | 4231183 - 4231692 | 17836.4 |
| hypothetical protein | OSCCYDRAFT_RS18665 | Not Available | Positive | 4231710 - 4232939 | 45101.5 |
| atp-binding protein | OSCCYDRAFT_RS18670 | Not Available | Negative | 4232957 - 4236577 | 133582.0 |
| circadian clock protein kaia | OSCCYDRAFT_RS18675 | Q79V62 | Positive | 4236974 - 4237753 | 29984.1 |
| circadian clock protein kaib | OSCCYDRAFT_RS18680 | Q10Y25 | Positive | 4237792 - 4238121 | 12202.0 |
| circadian clock protein kaic | OSCCYDRAFT_RS18685 | Q6L8L5 | Positive | 4238216 - 4239766 | 57607.8 |
| fad-dependent hydroxylase | OSCCYDRAFT_RS18690 | P72835 | Positive | 4239998 - 4241284 | 47981.3 |
| thioredoxin-disulfide reductase | OSCCYDRAFT_RS18695 | Q70G58 | Negative | 4241352 - 4242722 | 50009.3 |
| filamentous hemagglutinin n-terminal domain-containing protein | OSCCYDRAFT_RS25065 | Not Available | Positive | 4242866 - 4245646 | 94148.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.