Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf309 domain-containing protein | OSCCYDRAFT_RS18265 | Not Available | Positive | 4134317 - 4134742 | 15618.5 |
| lpta/osta family protein | OSCCYDRAFT_RS18270 | Not Available | Positive | 4134845 - 4135417 | 20662.6 |
| lps export abc transporter atp-binding protein | OSCCYDRAFT_RS18275 | P24693 | Positive | 4135501 - 4136229 | 27275.9 |
| lptf/lptg family permease | OSCCYDRAFT_RS18280 | Not Available | Positive | 4136350 - 4137462 | 41610.2 |
| xdd3 family exosortase-dependent surface protein | OSCCYDRAFT_RS18285 | Not Available | Positive | 4137659 - 4138516 | 29582.9 |
| nadp-dependent isocitrate dehydrogenase | OSCCYDRAFT_RS18290 | P50214 | Negative | 4138621 - 4140045 | 52653.3 |
| isoaspartyl peptidase/l-asparaginase | OSCCYDRAFT_RS18295 | Q8YQB1 | Negative | 4140249 - 4141223 | 34528.1 |
| duf2256 domain-containing protein | OSCCYDRAFT_RS25730 | Not Available | Negative | 4141263 - 4141436 | 6851.26 |
| hypothetical protein | OSCCYDRAFT_RS18300 | Not Available | Positive | 4142016 - 4142249 | 8454.08 |
| sigma-70 family rna polymerase sigma factor | OSCCYDRAFT_RS18305 | Not Available | Positive | 4142261 - 4143469 | 46272.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.