Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OSCCYDRAFT_RS18025 | Not Available | Negative | 4069103 - 4069444 | 13110.4 |
| hypothetical protein | OSCCYDRAFT_RS18030 | Not Available | Negative | 4069507 - 4069878 | 13840.2 |
| s-layer homology domain-containing protein | OSCCYDRAFT_RS18035 | Not Available | Positive | 4070144 - 4072252 | 75572.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | OSCCYDRAFT_RS18040 | Q8DK29 | Negative | 4072621 - 4073829 | 45519.0 |
| rna-binding protein | OSCCYDRAFT_RS18045 | Not Available | Positive | 4074108 - 4074380 | 10041.6 |
| pre-16s rrna-processing nuclease yqgf | OSCCYDRAFT_RS18050 | Not Available | Positive | 4074439 - 4074876 | 16627.5 |
| duf3146 family protein | OSCCYDRAFT_RS18055 | Not Available | Negative | 4074904 - 4075167 | 10184.1 |
| hypothetical protein | OSCCYDRAFT_RS18060 | Not Available | Negative | 4075199 - 4075507 | 11297.6 |
| aminoacyl-trna hydrolase | OSCCYDRAFT_RS18065 | Q110N1 | Negative | 4075591 - 4076241 | 23602.7 |
| aminoglycoside 6'-n-acetyltransferase | OSCCYDRAFT_RS18070 | Not Available | Negative | 4076254 - 4076694 | 16820.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.