Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 4026101 - 4026174 | Not Available |
| methylmalonic aciduria and homocystinuria type d protein | OSCCYDRAFT_RS25710 | Not Available | Positive | 4026251 - 4026793 | 19884.0 |
| cupin domain-containing protein | OSCCYDRAFT_RS17840 | Not Available | Negative | 4027124 - 4027399 | 10424.4 |
| ferredoxin | OSCCYDRAFT_RS17845 | P07324 | Negative | 4027433 - 4027852 | 15520.9 |
| dna-directed rna polymerase subunit beta' | OSCCYDRAFT_RS17850 | B0C385 | Negative | 4027991 - 4031977 | 145843.0 |
| dna-directed rna polymerase subunit gamma | OSCCYDRAFT_RS17855 | B0C2D1 | Negative | 4032071 - 4033945 | 70744.5 |
| dna-directed rna polymerase subunit beta | OSCCYDRAFT_RS17860 | Q3M5D0 | Negative | 4034048 - 4037341 | 123263.0 |
| tatd family hydrolase | OSCCYDRAFT_RS17865 | P73335 | Negative | 4037680 - 4038480 | 30023.0 |
| 30s ribosomal protein s20 | OSCCYDRAFT_RS17870 | Q8YWL3 | Negative | 4038576 - 4038881 | 11254.6 |
| histidinol dehydrogenase | OSCCYDRAFT_RS17875 | Q3M5D3 | Positive | 4039106 - 4040416 | 47258.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.