Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | OSCCYDRAFT_RS17430 | Not Available | Negative | 3937304 - 3937870 | 21496.6 |
| transposase | OSCCYDRAFT_RS17435 | Not Available | Positive | 3938052 - 3939392 | 51348.1 |
| vape domain-containing protein | OSCCYDRAFT_RS17440 | Not Available | Negative | 3939588 - 3941585 | 76314.9 |
| transposase | OSCCYDRAFT_RS17445 | Not Available | Positive | 3941584 - 3942924 | 51348.1 |
| uma2 family endonuclease | OSCCYDRAFT_RS26955 | Not Available | Negative | 3942901 - 3942969 | 2505.78 |
| helix-turn-helix domain-containing protein | OSCCYDRAFT_RS17450 | Not Available | Negative | 3943096 - 3943344 | 9540.55 |
| hypothetical protein | OSCCYDRAFT_RS17455 | Not Available | Negative | 3943644 - 3944189 | 21036.9 |
| ribbon-helix-helix domain-containing protein | OSCCYDRAFT_RS17460 | Not Available | Positive | 3944324 - 3944521 | 7056.31 |
| hypothetical protein | OSCCYDRAFT_RS17465 | Not Available | Positive | 3944514 - 3944747 | 9052.14 |
| hypothetical protein | OSCCYDRAFT_RS17470 | Not Available | Positive | 3944740 - 3945255 | 19253.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.