Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii-b crispr module-associated cmr3 family protein | OSCCYDRAFT_RS17230 | Not Available | Positive | 3899587 - 3900156 | 21158.2 |
| putative crispr-associated protein | OSCCYDRAFT_RS17235 | Not Available | Positive | 3900169 - 3901242 | 40659.1 |
| type iii-b crispr module ramp protein cmr4 | OSCCYDRAFT_RS17240 | Q8U1S9 | Positive | 3901252 - 3902187 | 33998.4 |
| type iii-b crispr module-associated protein cmr5 | OSCCYDRAFT_RS17245 | Not Available | Positive | 3902201 - 3902761 | 20945.6 |
| type iii-b crispr module ramp protein cmr6 | OSCCYDRAFT_RS17250 | Not Available | Positive | 3902758 - 3903546 | 29157.8 |
| duf1887 family protein | OSCCYDRAFT_RS17255 | Not Available | Positive | 3903673 - 3904989 | 49896.5 |
| cas10/cmr2 second palm domain-containing protein | OSCCYDRAFT_RS17260 | Not Available | Positive | 3904986 - 3906560 | 59128.1 |
| uma2 family endonuclease | OSCCYDRAFT_RS17265 | Not Available | Positive | 3906557 - 3907162 | 23062.5 |
| ramp superfamily crispr-associated protein | OSCCYDRAFT_RS17270 | Not Available | Positive | 3907163 - 3907816 | 23772.1 |
| ramp superfamily crispr-associated protein | OSCCYDRAFT_RS17275 | Not Available | Positive | 3907820 - 3909415 | 60658.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.