Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OSCCYDRAFT_RS17180 | Not Available | Negative | 3887800 - 3888213 | 15905.8 |
| hypothetical protein | OSCCYDRAFT_RS17185 | Not Available | Positive | 3888451 - 3888876 | 14959.9 |
| hypothetical protein | OSCCYDRAFT_RS17190 | Not Available | Positive | 3889494 - 3889946 | 16518.6 |
| ramp superfamily crispr-associated protein | OSCCYDRAFT_RS17195 | Not Available | Positive | 3889943 - 3890815 | 33310.4 |
| tigr03985 family crispr-associated protein | OSCCYDRAFT_RS17200 | Not Available | Negative | 3890866 - 3892314 | 55201.0 |
| crispr-associated ring nuclease crn3/csx3 | OSCCYDRAFT_RS17205 | O28415 | Positive | 3892384 - 3893301 | 33812.8 |
| type iii-b crispr module ramp protein cmr1 | OSCCYDRAFT_RS17210 | Q8U1S5 | Positive | 3893366 - 3894463 | 41382.8 |
| type iii-b crispr-associated protein cas10/cmr2 | OSCCYDRAFT_RS17215 | Q8U1S6 | Positive | 3894468 - 3897494 | 113869.0 |
| type iii-b crispr module-associated cmr3 family protein | OSCCYDRAFT_RS17220 | Not Available | Positive | 3897491 - 3898180 | 26062.9 |
| transposase | OSCCYDRAFT_RS17225 | Not Available | Positive | 3898217 - 3899557 | 51348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.