Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| photosystem ii reaction center protein cp43 | OSCCYDRAFT_RS14005 | D0VWR7 | Positive | 3191044 - 3192432 | 50274.6 |
| photosystem i assembly protein ycf4 | OSCCYDRAFT_RS14015 | B2J2W1 | Positive | 3192777 - 3193343 | 21001.7 |
| peptidylprolyl isomerase | OSCCYDRAFT_RS14020 | P72704 | Positive | 3193409 - 3194158 | 26773.0 |
| beta-ketoacyl-acp synthase | OSCCYDRAFT_RS14025 | P0AAI7 | Positive | 3194240 - 3195454 | 42508.2 |
| ydcf family protein | OSCCYDRAFT_RS14030 | Not Available | Negative | 3195366 - 3196637 | 47612.5 |
| cation:proton antiporter | OSCCYDRAFT_RS14035 | Not Available | Positive | 3197004 - 3198452 | 50131.4 |
| n-acetylmuramoyl-l-alanine amidase | OSCCYDRAFT_RS14040 | P50864 | Positive | 3198533 - 3199654 | 40736.5 |
| glutamate racemase | OSCCYDRAFT_RS14045 | Q9L870 | Positive | 3199710 - 3200564 | 31109.6 |
| hypothetical protein | OSCCYDRAFT_RS14050 | Not Available | Negative | 3200654 - 3201211 | 20570.3 |
| serine--trna ligase | OSCCYDRAFT_RS14055 | B0JTT9 | Negative | 3201302 - 3202582 | 47555.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.