Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | OSCCYDRAFT_RS12860 | Q9HK40 | Positive | 2924763 - 2924993 | 8506.21 |
| type ii toxin-antitoxin system hica family toxin | OSCCYDRAFT_RS12865 | Not Available | Positive | 2924990 - 2925211 | 7986.86 |
| uma2 family endonuclease | OSCCYDRAFT_RS12870 | Not Available | Negative | 2925232 - 2925786 | 20684.0 |
| uma2 family endonuclease | OSCCYDRAFT_RS12875 | Not Available | Negative | 2925834 - 2926247 | 15907.0 |
| four helix bundle protein | OSCCYDRAFT_RS12880 | Not Available | Positive | 2926443 - 2926865 | 15161.3 |
| Trna-arg | Not Available | Not Available | Positive | 2927363 - 2927436 | Not Available |
| hdig domain-containing metalloprotein | OSCCYDRAFT_RS12890 | Not Available | Negative | 2927549 - 2930047 | 91631.4 |
| adp-ribosylglycohydrolase family protein | OSCCYDRAFT_RS12895 | Not Available | Negative | 2930169 - 2931068 | 32335.9 |
| peptidoglycan-binding protein | OSCCYDRAFT_RS12900 | Not Available | Positive | 2931309 - 2932079 | 26527.9 |
| duf2259 domain-containing protein | OSCCYDRAFT_RS12905 | Not Available | Negative | 2932128 - 2932943 | 29393.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.