Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | OSCCYDRAFT_RS11960 | B2J6D0 | Positive | 2712954 - 2713994 | 38628.7 |
| biopolymer transporter exbd | OSCCYDRAFT_RS11970 | P72942 | Negative | 2714509 - 2714898 | 14138.6 |
| mota/tolq/exbb proton channel family protein | OSCCYDRAFT_RS11975 | Q55834 | Negative | 2714938 - 2715630 | 25132.9 |
| hypothetical protein | OSCCYDRAFT_RS24810 | Not Available | Negative | 2715824 - 2716891 | 37833.9 |
| hypothetical protein | OSCCYDRAFT_RS11985 | Not Available | Negative | 2716943 - 2717332 | 14574.8 |
| atp-binding cassette domain-containing protein | OSCCYDRAFT_RS11990 | Q45460 | Positive | 2717534 - 2718298 | 28324.6 |
| abc transporter permease | OSCCYDRAFT_RS11995 | O34878 | Positive | 2718295 - 2718918 | 21722.7 |
| pin/tram domain-containing protein | OSCCYDRAFT_RS12000 | P74117 | Negative | 2718974 - 2720056 | 38809.5 |
| radical sam family heme chaperone hemw | OSCCYDRAFT_RS12005 | P73245 | Positive | 2720358 - 2721638 | 47521.4 |
| thioredoxin family protein | OSCCYDRAFT_RS12010 | P73920 | Negative | 2722045 - 2722644 | 21354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.