Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | OSCCYDRAFT_RS11725 | Q8YXA2 | Negative | 2664121 - 2665212 | 38963.2 |
| hupe/urej family protein | OSCCYDRAFT_RS11730 | Not Available | Negative | 2665251 - 2665883 | 21299.7 |
| metal abc transporter solute-binding protein, zn/mn family | OSCCYDRAFT_RS11735 | Q9KFG3 | Negative | 2666042 - 2667025 | 35602.3 |
| carbohydrate abc transporter permease | OSCCYDRAFT_RS11740 | Not Available | Positive | 2667187 - 2668023 | 31213.1 |
| had family phosphatase | OSCCYDRAFT_RS11745 | Q9ZVJ5 | Positive | 2668085 - 2668780 | 25192.1 |
| tocopherol cyclase family protein | OSCCYDRAFT_RS11750 | Q6K7V6 | Negative | 2668736 - 2669860 | 42900.5 |
| iron uptake porin | OSCCYDRAFT_RS11755 | Not Available | Positive | 2670098 - 2671861 | 64155.8 |
| rrf2 family transcriptional regulator | OSCCYDRAFT_RS11760 | O34527 | Positive | 2672123 - 2672560 | 16433.8 |
| cysteine synthase a | OSCCYDRAFT_RS11765 | P73410 | Positive | 2672576 - 2673538 | 33978.4 |
| j domain-containing protein | OSCCYDRAFT_RS11770 | B8HLD2 | Positive | 2673703 - 2674410 | 27335.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.