Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1802 family protein | OSCCYDRAFT_RS10975 | Not Available | Negative | 2492637 - 2493215 | 22353.2 |
| s9 family peptidase | OSCCYDRAFT_RS10980 | V5YMB3 | Negative | 2493615 - 2495543 | 71247.5 |
| transposase | OSCCYDRAFT_RS10985 | Not Available | Negative | 2495768 - 2497108 | 51348.1 |
| hypothetical protein | OSCCYDRAFT_RS10990 | Not Available | Negative | 2497254 - 2498015 | 26854.8 |
| rna polymerase sigma factor | OSCCYDRAFT_RS10995 | Not Available | Positive | 2498588 - 2499235 | 24497.3 |
| tetratricopeptide repeat protein | OSCCYDRAFT_RS11000 | Not Available | Positive | 2499372 - 2500448 | 39780.9 |
| voc family protein | OSCCYDRAFT_RS11005 | Not Available | Positive | 2500541 - 2500906 | 13468.2 |
| amidohydrolase family protein | OSCCYDRAFT_RS11010 | Q466Q9 | Negative | 2500970 - 2502526 | 57811.4 |
| lipoyl(octanoyl) transferase lipb | OSCCYDRAFT_RS11015 | B2IVM2 | Negative | 2502688 - 2503380 | 25942.5 |
| ribosome hibernation-promoting factor, hpf/yfia family | OSCCYDRAFT_RS11020 | P74518 | Positive | 2503680 - 2504324 | 24331.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.