Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| photosystem ii reaction center protein psb28 | OSCCYDRAFT_RS10205 | Not Available | Negative | 2308662 - 2309042 | 14709.3 |
| hypothetical protein | OSCCYDRAFT_RS10210 | Not Available | Positive | 2309187 - 2310017 | 30218.7 |
| hypothetical protein | OSCCYDRAFT_RS10215 | Not Available | Negative | 2310014 - 2310970 | 36495.3 |
| shikimate kinase | OSCCYDRAFT_RS10220 | B2IX35 | Positive | 2311248 - 2311766 | 19079.8 |
| primosomal protein n' | OSCCYDRAFT_RS10225 | P74397 | Positive | 2311954 - 2314506 | 94004.8 |
| uma2 family endonuclease | OSCCYDRAFT_RS26720 | Not Available | Negative | 2314573 - 2315914 | 48053.8 |
| tandem-95 repeat protein | OSCCYDRAFT_RS10240 | Not Available | Positive | 2316469 - 2321862 | 188337.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | OSCCYDRAFT_RS10245 | Q8YW18 | Negative | 2321875 - 2322981 | 41227.7 |
| hypothetical protein | OSCCYDRAFT_RS10250 | Not Available | Positive | 2323155 - 2323541 | 14879.0 |
| udp-glucuronic acid decarboxylase family protein | OSCCYDRAFT_RS10255 | Q9ZV36 | Positive | 2324116 - 2325084 | 36557.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.