Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | OSCCYDRAFT_RS10005 | Not Available | Positive | 2265659 - 2266801 | 39529.6 |
| abc transporter permease | OSCCYDRAFT_RS10010 | Not Available | Positive | 2266882 - 2267841 | 33454.7 |
| abc transporter atp-binding protein | OSCCYDRAFT_RS10015 | D4GPW3 | Positive | 2267949 - 2269514 | 56580.9 |
| cysteine hydrolase family protein | OSCCYDRAFT_RS10020 | Not Available | Positive | 2269583 - 2270275 | 25186.7 |
| helix-turn-helix domain-containing protein | OSCCYDRAFT_RS10025 | Not Available | Negative | 2270340 - 2271101 | 27871.2 |
| hypothetical protein | OSCCYDRAFT_RS10030 | Not Available | Positive | 2271167 - 2271388 | 8563.09 |
| polyphosphate kinase 1 | OSCCYDRAFT_RS10035 | Not Available | Positive | 2271391 - 2273526 | 81284.1 |
| rna polymerase sigma factor rpod/siga | OSCCYDRAFT_RS10040 | O66381 | Positive | 2274082 - 2275107 | 39400.5 |
| 6-phosphogluconolactonase | OSCCYDRAFT_RS10045 | P46016 | Positive | 2275420 - 2276136 | 26130.3 |
| fha domain-containing protein | OSCCYDRAFT_RS10050 | P46017 | Positive | 2276256 - 2277029 | 27016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.