Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | OSCCYDRAFT_RS08965 | Not Available | Negative | 2044345 - 2044740 | 15065.0 |
| signal peptide peptidase sppa | OSCCYDRAFT_RS08970 | Q55682 | Negative | 2044870 - 2045709 | 31109.8 |
| dmt family transporter | OSCCYDRAFT_RS08975 | Not Available | Positive | 2045933 - 2047003 | 38578.9 |
| glycosyltransferase family 4 protein | OSCCYDRAFT_RS08980 | Not Available | Positive | 2047052 - 2048140 | 39819.7 |
| hypothetical protein | OSCCYDRAFT_RS08985 | Not Available | Positive | 2048230 - 2048535 | 11037.7 |
| 3-isopropylmalate dehydratase large subunit | OSCCYDRAFT_RS08990 | B2J3M9 | Positive | 2048613 - 2050022 | 50714.6 |
| asparagine--trna ligase | OSCCYDRAFT_RS08995 | P58692 | Positive | 2050153 - 2051541 | 52569.5 |
| duf1643 domain-containing protein | OSCCYDRAFT_RS09000 | Not Available | Negative | 2051501 - 2052031 | 20298.6 |
| hypothetical protein | OSCCYDRAFT_RS09005 | Not Available | Negative | 2052028 - 2052636 | 23013.4 |
| thylakoid membrane photosystem i accumulation factor | OSCCYDRAFT_RS09010 | P72804 | Negative | 2052841 - 2053443 | 22284.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.