Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat-containing protein | OSCCYDRAFT_RS08330 | Not Available | Positive | 1906286 - 1906723 | 14713.5 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | OSCCYDRAFT_RS08335 | P39045 | Negative | 1906742 - 1908244 | 52581.9 |
| hypothetical protein | OSCCYDRAFT_RS08340 | Not Available | Negative | 1908324 - 1908626 | 11342.6 |
| duf4332 domain-containing protein | OSCCYDRAFT_RS08345 | Not Available | Negative | 1908750 - 1909778 | 36841.8 |
| hypothetical protein | OSCCYDRAFT_RS08350 | Not Available | Negative | 1909989 - 1910510 | 18655.3 |
| biosynthetic-type acetolactate synthase large subunit | OSCCYDRAFT_RS08355 | Q7U5G1 | Negative | 1910820 - 1912655 | 66858.6 |
| lipoxygenase family protein | OSCCYDRAFT_RS08360 | P39655 | Positive | 1912999 - 1914888 | 70961.2 |
| heat repeat domain-containing protein | OSCCYDRAFT_RS08365 | Not Available | Negative | 1914923 - 1915678 | 27600.9 |
| hypothetical protein | OSCCYDRAFT_RS08370 | Not Available | Negative | 1915741 - 1915956 | 8380.08 |
| nitrate reductase associated protein | OSCCYDRAFT_RS08375 | Not Available | Negative | 1916365 - 1916838 | 17750.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.