Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hopanoid-associated sugar epimerase | OSCCYDRAFT_RS08150 | P73212 | Positive | 1860049 - 1861032 | 36372.9 |
| adenosyl-hopene transferase hpnh | OSCCYDRAFT_RS08155 | Q7TX84 | Positive | 1861151 - 1862173 | 38569.2 |
| squalene/phytoene synthase family protein | OSCCYDRAFT_RS08160 | Not Available | Positive | 1862847 - 1863668 | 30057.8 |
| glycine cleavage system protein gcvh | OSCCYDRAFT_RS08165 | Q3M9G2 | Negative | 1863899 - 1864288 | 14041.2 |
| glycine cleavage system aminomethyltransferase gcvt | OSCCYDRAFT_RS08170 | Q8YNF7 | Negative | 1864431 - 1865558 | 41482.5 |
| duf3253 domain-containing protein | OSCCYDRAFT_RS08175 | Not Available | Negative | 1865925 - 1866206 | 10642.1 |
| exonuclease subunit sbcd | OSCCYDRAFT_RS08180 | Not Available | Negative | 1866289 - 1867587 | 48510.4 |
| hypothetical protein | OSCCYDRAFT_RS27325 | Not Available | Positive | 1867534 - 1867674 | 5045.89 |
| transposase | OSCCYDRAFT_RS08185 | Not Available | Negative | 1867709 - 1868704 | 38121.6 |
| hypothetical protein | OSCCYDRAFT_RS08190 | Not Available | Positive | 1868755 - 1869309 | 19679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.