Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | OSCCYDRAFT_RS06810 | Q2LWY9 | Negative | 1583552 - 1584037 | 17764.2 |
| uma2 family endonuclease | OSCCYDRAFT_RS26050 | P29979 | Negative | 1584242 - 1584496 | 9569.53 |
| amylo-alpha-1,6-glucosidase | OSCCYDRAFT_RS06815 | Not Available | Negative | 1584585 - 1586588 | 75197.5 |
| argininosuccinate synthase | OSCCYDRAFT_RS06820 | Q117P0 | Positive | 1586794 - 1587996 | 43515.9 |
| had-ia family hydrolase | OSCCYDRAFT_RS06825 | Not Available | Positive | 1588170 - 1588820 | 24355.9 |
| hypothetical protein | OSCCYDRAFT_RS06830 | Not Available | Negative | 1588893 - 1589315 | 16297.1 |
| duf6439 family protein | OSCCYDRAFT_RS06835 | Not Available | Positive | 1589362 - 1589637 | 9982.93 |
| hypothetical protein | OSCCYDRAFT_RS06840 | Not Available | Negative | 1589694 - 1589975 | 10160.0 |
| dihydroxy-acid dehydratase | OSCCYDRAFT_RS06845 | Q8DK13 | Positive | 1590368 - 1592056 | 59347.7 |
| abc transporter substrate-binding protein | OSCCYDRAFT_RS06850 | P33950 | Positive | 1592278 - 1593936 | 61251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.