Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | OSCCYDRAFT_RS06025 | B7K9K1 | Positive | 1406244 - 1408079 | 67821.5 |
| duf2993 domain-containing protein | OSCCYDRAFT_RS24645 | Not Available | Positive | 1408205 - 1409050 | 32113.2 |
| germn domain-containing protein | OSCCYDRAFT_RS06035 | Not Available | Positive | 1409195 - 1409860 | 23655.1 |
| phosphomannose isomerase type ii c-terminal cupin domain | OSCCYDRAFT_RS06040 | Q07024 | Positive | 1409975 - 1410367 | 14709.5 |
| hypothetical protein | OSCCYDRAFT_RS26585 | Not Available | Negative | 1410378 - 1410545 | 6256.5 |
| hypothetical protein | OSCCYDRAFT_RS06045 | Not Available | Negative | 1410890 - 1411423 | 18266.6 |
| hypothetical protein | OSCCYDRAFT_RS06050 | Not Available | Positive | 1411628 - 1412050 | 14818.6 |
| hypothetical protein | OSCCYDRAFT_RS06055 | Not Available | Negative | 1412178 - 1412558 | 14198.6 |
| cytochrome b6-f complex subunit iv | OSCCYDRAFT_RS06060 | Q116S6 | Negative | 1412735 - 1413217 | 17468.9 |
| cytochrome b6 | OSCCYDRAFT_RS06065 | B8HWC6 | Negative | 1413328 - 1413996 | 25087.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.